BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022H04SP1|AL427964
(817 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig488 1612 0.0
>3x_Contig488
Length = 1926
Score = 1612 bits (811), Expect = 0.0
Identities = 813/815 (99%)
Strand = Plus / Plus
Query: 1 gatcgacagaatgtgrcgaatccagagaatgtagagattggtgtgaatatccgctattag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gatcgacagaatgtgacgaatccagagaatgtagagattggtgtgaatatccgctattag 701
Query: 61 tatgttttgatattttaccattgatatccagtcctacagcggaattgccttgatgtgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tatgttttgatattttaccattgatatccagtcctacagcggaattgccttgatgtgatt 761
Query: 121 gttttttccttcttggcgcacgcttcttatgacacgggcagtgatccggatcattcttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gttttttccttcttggcgcacgcttcttatgacacgggcagtgatccggatcattcttac 821
Query: 181 aaacacatcccgattcttctcttgccttctgtgcgatccgtttcttctcttgtcgcccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 aaacacatcccgattcttctcttgccttctgtgcgatccgtttcttctcttgtcgcccac 881
Query: 241 aagtgcattggcccgatggattcgcattcctgttcttccgtagttctttacaatgagcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 aagtgcattggcccgatggattcgcattcctgttcttccgtagttctttacaatgagcac 941
Query: 301 aagtcgttgacggcctacctttcggtttaatcatagtcaacggctgatctgtatggttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 aagtcgttgacggcctacctttcggtttaatcatagtcaacggctgatctgtatggttac 1001
Query: 361 atgtagtcactctgtgtcctctaatacacctttcacaggcatatttcacaccgttgataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 atgtagtcactctgtgtcctctaatacacctttcacaggcatatttcacaccgttgataa 1061
Query: 421 gaaccattgtgtgctatttgaatgcgatacagaatgtgtctgtkctgtcttcagtgaata 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1062 gaaccattgtgtgctatttgaatgcgatacagaatgtgtctgtgctgtcttcagtgaata 1121
Query: 481 ataaccacaaaaaaagcttcaaaagtcagcagtaagaagccagcaaagggacaatgaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 ataaccacaaaaaaagcttcaaaagtcagcagtaagaagccagcaaagggacaatgaaaa 1181
Query: 541 tgacaattagggagtgtgaatattaagacaaatgaattagattaggtcactccaatatgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 tgacaattagggagtgtgaatattaagacaaatgaattagattaggtcactccaatatgt 1241
Query: 601 gtgttttctttttctttccttaaagttgattaagccgttgtctgactaaaaatcctacca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 gtgttttctttttctttccttaaagttgattaagccgttgtctgactaaaaatcctacca 1301
Query: 661 gaaagagaagagaaagaaaaaaaggaagatattcagccttataattgggggttggatact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 gaaagagaagagaaagaaaaaaaggaagatattcagccttataattgggggttggatact 1361
Query: 721 gagaacgtgaacagaataagccagagacagcagtttctctatcaatctcctcaaatacta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 gagaacgtgaacagaataagccagagacagcagtttctctatcaatctcctcaaatacta 1421
Query: 781 gtcaaaaacactgatatatagtatcttttttttat 815
|||||||||||||||||||||||||||||||||||
Sbjct: 1422 gtcaaaaacactgatatatagtatcttttttttat 1456
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7361
Number of Sequences: 1807
Number of extensions: 7361
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 817
length of database: 10,358,551
effective HSP length: 16
effective length of query: 801
effective length of database: 10,329,639
effective search space: 8274040839
effective search space used: 8274040839
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)